Software

The page lists public open source software, which does not include software related to computational physics, electrical engineering, causal inference and industry-related software.

Initial conception & development

Supervision of lead developer

  • scgen: Generative modeling of single-cell perturbation response
  • scvelo: Dynamic model for RNA velocity for single cells

Major contributions

  • Data Science Bowl 2017: major contributions to 7th prize (out of 2400 participating teams) winning deep learning pipeline in highest endowed ($1M prize money) machine learning competition 2017